The automatic analysis of microscope imagery plays
an increasingly important role in biosciences
research. Novel imaging devices such as the confocal
and two photon (or multi-photon) electron
microscope, automated stages for electron
microscopy, and higher resolution electron
tomography enable researchers to image biological
systems at the cellular and sub-cellular
scale. These datasets pose a number of challenges
that are very distinct from conventional clinical
imagery in their size and abundance, the detail of
relevant features and their
statistics. Sophisticated algorithms are necessary
to process such imagery and extract biologically
relevant features and information. The design,
development and application of such algorithms are
the focus of this workshop.
The first international
workshop on Microscopic Image Analysis with Applications in Biology,
MIAAB 2006 was held in conjuction with MICCAI 2006. Based on the strong interest and high
quality of the submissions we decided to hold this workshop
as an independent one day event in 2007.
We welcome original, previously unpublished papers
on image analysis of microscopic data that focus on
biomedical applications.
Papers on all microscopic
data including widefield, fluorescence, confocal,
multiphoton, multi-spectral, phase contrast,
differential interference contrast, quadrature
tomographic are welcome. The suggested list of topics are
Image formation and reconstruction
Multi-spectral and volume segmentation
Shape analysis and morphology
Visual tracking and motion analysis
of timelapse microscopy data
Computer-aided detection and counting
Feature extraction and pattern recognition
enabling high-content analysis
Image analysis for high-content screening
Statistical methods and population based analysis
Spatiotemporal dynamics of signaling pathways
Disease-specific analysis of tissue arrays for pathology
In addition to these topics special consideration will be given to contributions
that present challenging image analysis problems in this application space.
The workshop will be hosted at the DIMACS
center at the Rutgers, The State University of New Jersey, Piscatway, NJ. The
close proximity to a number of pharmaceutical and industrial research labs
will facilitate an interaction between computer scientists, biologists and engineers from
both academia and industry. The workshop program will include two invited speakers who will outline the challenges both from the technial and the biological perspective. The invited talks will be given by
Jelena Kovacevic, Carnegie Mellon University
Gustavo Leone, The Ohio State University
Authors are encouraged to submit an extended version of their workshop proceedings manuscript
to the journal, Cytometry,
part A for consideration for peer-review publication. Cytometry submission should contain
at least 30% new material not in the accepted proceedings manuscript.
Dates:
Paper Submission: July 30 2007
Notification of Acceptance: August 31 2007
Workshop date: Sep 21 2007
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